MANIFEST.in
README.rst
setup.py
AlphaHousePython/CMakeLists.txt
AlphaHousePython/CTestTestfile.cmake
AlphaHousePython/Exceptions.cpython-36m-darwin.so
AlphaHousePython/Makefile
AlphaHousePython/PyIntersectCompare.cpython-36m-darwin.so
AlphaHousePython/__init__.py
AlphaHousePython/cmake_install.cmake
AlphaHousePython/gen.cpython-36m-darwin.so
AlphaHousePython/hap.cpython-36m-darwin.so
AlphaHousePython/haplib.cpython-36m-darwin.so
AlphaHousePython/ped.cpython-36m-darwin.so
AlphaHousePython.egg-info/PKG-INFO
AlphaHousePython.egg-info/SOURCES.txt
AlphaHousePython.egg-info/dependency_links.txt
AlphaHousePython.egg-info/top_level.txt
AlphaHousePython/CMakeFiles/CMakeDirectoryInformation.cmake
AlphaHousePython/CMakeFiles/progress.marks
AlphaHousePython/cpp_src/CMakeLists.txt
AlphaHousePython/cpp_src/CTestTestfile.cmake
AlphaHousePython/cpp_src/Exceptions.c
AlphaHousePython/cpp_src/Exceptions.cpp
AlphaHousePython/cpp_src/Exceptions.py
AlphaHousePython/cpp_src/Exceptions.so
AlphaHousePython/cpp_src/GenotypeTest.py
AlphaHousePython/cpp_src/HaplotypeTest.py
AlphaHousePython/cpp_src/Makefile
AlphaHousePython/cpp_src/PyIntersectCompare.cpp
AlphaHousePython/cpp_src/PyIntersectCompare.cpython-36m-darwin.so
AlphaHousePython/cpp_src/PyIntersectCompare.cxx
AlphaHousePython/cpp_src/PyIntersectCompare.pxd
AlphaHousePython/cpp_src/PyIntersectCompare.pyx
AlphaHousePython/cpp_src/PyIntersectCompare.so
AlphaHousePython/cpp_src/alphahousepython.pxd
AlphaHousePython/cpp_src/cmake_install.cmake
AlphaHousePython/cpp_src/dict.pickle
AlphaHousePython/cpp_src/gen.cpp
AlphaHousePython/cpp_src/gen.cpython-36m-darwin.so
AlphaHousePython/cpp_src/gen.cxx
AlphaHousePython/cpp_src/gen.pxd
AlphaHousePython/cpp_src/gen.pyx
AlphaHousePython/cpp_src/gen.so
AlphaHousePython/cpp_src/hap.cpp
AlphaHousePython/cpp_src/hap.cpython-36m-darwin.so
AlphaHousePython/cpp_src/hap.cxx
AlphaHousePython/cpp_src/hap.pxd
AlphaHousePython/cpp_src/hap.pyx
AlphaHousePython/cpp_src/hap.so
AlphaHousePython/cpp_src/haplib.cpp
AlphaHousePython/cpp_src/haplib.cxx
AlphaHousePython/cpp_src/haplib.pxd
AlphaHousePython/cpp_src/haplib.pyx
AlphaHousePython/cpp_src/haplib.so
AlphaHousePython/cpp_src/ped.cpp
AlphaHousePython/cpp_src/ped.cxx
AlphaHousePython/cpp_src/ped.pxd
AlphaHousePython/cpp_src/ped.pyx
AlphaHousePython/cpp_src/ped.so
AlphaHousePython/cpp_src/test.py
AlphaHousePython/cpp_src/AlphahousePython.egg-info/PKG-INFO
AlphaHousePython/cpp_src/AlphahousePython.egg-info/SOURCES.txt
AlphaHousePython/cpp_src/AlphahousePython.egg-info/dependency_links.txt
AlphaHousePython/cpp_src/AlphahousePython.egg-info/top_level.txt
AlphaHousePython/cpp_src/CMakeFiles/CMakeDirectoryInformation.cmake
AlphaHousePython/cpp_src/CMakeFiles/progress.marks
AlphaHousePython/cpp_src/CMakeFiles/Exceptions.dir/C.includecache
AlphaHousePython/cpp_src/CMakeFiles/Exceptions.dir/DependInfo.cmake
AlphaHousePython/cpp_src/CMakeFiles/Exceptions.dir/Exceptions.c.o
AlphaHousePython/cpp_src/CMakeFiles/Exceptions.dir/build.make
AlphaHousePython/cpp_src/CMakeFiles/Exceptions.dir/cmake_clean.cmake
AlphaHousePython/cpp_src/CMakeFiles/Exceptions.dir/depend.internal
AlphaHousePython/cpp_src/CMakeFiles/Exceptions.dir/depend.make
AlphaHousePython/cpp_src/CMakeFiles/Exceptions.dir/flags.make
AlphaHousePython/cpp_src/CMakeFiles/Exceptions.dir/link.txt
AlphaHousePython/cpp_src/CMakeFiles/Exceptions.dir/progress.make
AlphaHousePython/cpp_src/CMakeFiles/PyIntersectCompare.dir/CXX.includecache
AlphaHousePython/cpp_src/CMakeFiles/PyIntersectCompare.dir/DependInfo.cmake
AlphaHousePython/cpp_src/CMakeFiles/PyIntersectCompare.dir/PyIntersectCompare.cxx.o
AlphaHousePython/cpp_src/CMakeFiles/PyIntersectCompare.dir/build.make
AlphaHousePython/cpp_src/CMakeFiles/PyIntersectCompare.dir/cmake_clean.cmake
AlphaHousePython/cpp_src/CMakeFiles/PyIntersectCompare.dir/depend.internal
AlphaHousePython/cpp_src/CMakeFiles/PyIntersectCompare.dir/depend.make
AlphaHousePython/cpp_src/CMakeFiles/PyIntersectCompare.dir/flags.make
AlphaHousePython/cpp_src/CMakeFiles/PyIntersectCompare.dir/link.txt
AlphaHousePython/cpp_src/CMakeFiles/PyIntersectCompare.dir/progress.make
AlphaHousePython/cpp_src/CMakeFiles/PyIntersectCompare.dir/alphahousenative/IntersectCompare.cpp.o
AlphaHousePython/cpp_src/CMakeFiles/gen.dir/CXX.includecache
AlphaHousePython/cpp_src/CMakeFiles/gen.dir/DependInfo.cmake
AlphaHousePython/cpp_src/CMakeFiles/gen.dir/build.make
AlphaHousePython/cpp_src/CMakeFiles/gen.dir/cmake_clean.cmake
AlphaHousePython/cpp_src/CMakeFiles/gen.dir/depend.internal
AlphaHousePython/cpp_src/CMakeFiles/gen.dir/depend.make
AlphaHousePython/cpp_src/CMakeFiles/gen.dir/flags.make
AlphaHousePython/cpp_src/CMakeFiles/gen.dir/gen.cxx.o
AlphaHousePython/cpp_src/CMakeFiles/gen.dir/link.txt
AlphaHousePython/cpp_src/CMakeFiles/gen.dir/progress.make
AlphaHousePython/cpp_src/CMakeFiles/gen.dir/alphahousenative/Genotype.cpp.o
AlphaHousePython/cpp_src/CMakeFiles/gen.dir/alphahousenative/Haplotype.cpp.o
AlphaHousePython/cpp_src/CMakeFiles/gen.dir/alphahousenative/IntersectCompare.cpp.o
AlphaHousePython/cpp_src/CMakeFiles/hap.dir/CXX.includecache
AlphaHousePython/cpp_src/CMakeFiles/hap.dir/DependInfo.cmake
AlphaHousePython/cpp_src/CMakeFiles/hap.dir/build.make
AlphaHousePython/cpp_src/CMakeFiles/hap.dir/cmake_clean.cmake
AlphaHousePython/cpp_src/CMakeFiles/hap.dir/depend.internal
AlphaHousePython/cpp_src/CMakeFiles/hap.dir/depend.make
AlphaHousePython/cpp_src/CMakeFiles/hap.dir/flags.make
AlphaHousePython/cpp_src/CMakeFiles/hap.dir/hap.cxx.o
AlphaHousePython/cpp_src/CMakeFiles/hap.dir/link.txt
AlphaHousePython/cpp_src/CMakeFiles/hap.dir/progress.make
AlphaHousePython/cpp_src/CMakeFiles/hap.dir/alphahousenative/Genotype.cpp.o
AlphaHousePython/cpp_src/CMakeFiles/hap.dir/alphahousenative/Haplotype.cpp.o
AlphaHousePython/cpp_src/CMakeFiles/hap.dir/alphahousenative/IntersectCompare.cpp.o
AlphaHousePython/cpp_src/CMakeFiles/haplib.dir/CXX.includecache
AlphaHousePython/cpp_src/CMakeFiles/haplib.dir/DependInfo.cmake
AlphaHousePython/cpp_src/CMakeFiles/haplib.dir/build.make
AlphaHousePython/cpp_src/CMakeFiles/haplib.dir/cmake_clean.cmake
AlphaHousePython/cpp_src/CMakeFiles/haplib.dir/depend.internal
AlphaHousePython/cpp_src/CMakeFiles/haplib.dir/depend.make
AlphaHousePython/cpp_src/CMakeFiles/haplib.dir/flags.make
AlphaHousePython/cpp_src/CMakeFiles/haplib.dir/haplib.cxx.o
AlphaHousePython/cpp_src/CMakeFiles/haplib.dir/link.txt
AlphaHousePython/cpp_src/CMakeFiles/haplib.dir/progress.make
AlphaHousePython/cpp_src/CMakeFiles/haplib.dir/alphahousenative/Haplotype.cpp.o
AlphaHousePython/cpp_src/CMakeFiles/haplib.dir/alphahousenative/HaplotypeLibrary.cpp.o
AlphaHousePython/cpp_src/CMakeFiles/haplib.dir/alphahousenative/IntersectCompare.cpp.o
AlphaHousePython/cpp_src/CMakeFiles/ped.dir/CXX.includecache
AlphaHousePython/cpp_src/CMakeFiles/ped.dir/DependInfo.cmake
AlphaHousePython/cpp_src/CMakeFiles/ped.dir/build.make
AlphaHousePython/cpp_src/CMakeFiles/ped.dir/cmake_clean.cmake
AlphaHousePython/cpp_src/CMakeFiles/ped.dir/depend.internal
AlphaHousePython/cpp_src/CMakeFiles/ped.dir/depend.make
AlphaHousePython/cpp_src/CMakeFiles/ped.dir/flags.make
AlphaHousePython/cpp_src/CMakeFiles/ped.dir/link.txt
AlphaHousePython/cpp_src/CMakeFiles/ped.dir/ped.cxx.o
AlphaHousePython/cpp_src/CMakeFiles/ped.dir/progress.make
AlphaHousePython/cpp_src/CMakeFiles/ped.dir/alphahousenative/Genotype.cpp.o
AlphaHousePython/cpp_src/CMakeFiles/ped.dir/alphahousenative/Haplotype.cpp.o
AlphaHousePython/cpp_src/CMakeFiles/ped.dir/alphahousenative/Imputation.cpp.o
AlphaHousePython/cpp_src/CMakeFiles/ped.dir/alphahousenative/IntersectCompare.cpp.o
AlphaHousePython/cpp_src/CMakeFiles/ped.dir/alphahousenative/Pedigree.cpp.o
AlphaHousePython/cpp_src/__pycache__/GenotypeTest.cpython-36.pyc
AlphaHousePython/cpp_src/__pycache__/HaplotypeTest.cpython-36.pyc
AlphaHousePython/cpp_src/alphahousenative/.git
AlphaHousePython/cpp_src/alphahousenative/.gitignore
AlphaHousePython/cpp_src/alphahousenative/Genotype.cpp
AlphaHousePython/cpp_src/alphahousenative/Genotype.d
AlphaHousePython/cpp_src/alphahousenative/Genotype.o
AlphaHousePython/cpp_src/alphahousenative/Haplotype.cpp
AlphaHousePython/cpp_src/alphahousenative/Haplotype.d
AlphaHousePython/cpp_src/alphahousenative/Haplotype.o
AlphaHousePython/cpp_src/alphahousenative/HaplotypeLibrary.cpp
AlphaHousePython/cpp_src/alphahousenative/Imputation.cpp
AlphaHousePython/cpp_src/alphahousenative/IndividualHelper.cpp
AlphaHousePython/cpp_src/alphahousenative/IndividualHelper.d
AlphaHousePython/cpp_src/alphahousenative/IndividualHelper.o
AlphaHousePython/cpp_src/alphahousenative/IntersectCompare.cpp
AlphaHousePython/cpp_src/alphahousenative/IntersectCompare.d
AlphaHousePython/cpp_src/alphahousenative/IntersectCompare.o
AlphaHousePython/cpp_src/alphahousenative/Pedigree.cpp
AlphaHousePython/cpp_src/alphahousenative/Pedigree.d
AlphaHousePython/cpp_src/alphahousenative/Pedigree.o
AlphaHousePython/cpp_src/alphahousenative/README.md
AlphaHousePython/cpp_src/alphahousenative/alphahousepython.h
AlphaHousePython/cpp_src/alphahousenative/main
AlphaHousePython/cpp_src/alphahousenative/main.cpp
AlphaHousePython/cpp_src/alphahousenative/main.d
AlphaHousePython/cpp_src/alphahousenative/main.o
AlphaHousePython/cpp_src/alphahousenative/tempPed.txt
AlphaHousePython/cpp_src/build/lib.macosx-10.6-x86_64-3.6/PyIntersectCompare.cpython-36m-darwin.so
AlphaHousePython/cpp_src/build/lib.macosx-10.6-x86_64-3.6/gen.cpython-36m-darwin.so
AlphaHousePython/cpp_src/build/lib.macosx-10.6-x86_64-3.6/hap.cpython-36m-darwin.so
AlphaHousePython/cpp_src/build/temp.macosx-10.6-x86_64-3.6/PyIntersectCompare.o
AlphaHousePython/cpp_src/build/temp.macosx-10.6-x86_64-3.6/gen.o
AlphaHousePython/cpp_src/build/temp.macosx-10.6-x86_64-3.6/hap.o
AlphaHousePython/cpp_src/build/temp.macosx-10.6-x86_64-3.6/alphahousenative/Genotype.o
AlphaHousePython/cpp_src/build/temp.macosx-10.6-x86_64-3.6/alphahousenative/Haplotype.o
AlphaHousePython/cpp_src/build/temp.macosx-10.6-x86_64-3.6/alphahousenative/IntersectCompare.o
AlphaHousePython/cpp_src/cython_debug/cython_debug_info_PyIntersectCompare
AlphaHousePython/cpp_src/cython_debug/cython_debug_info_gen
AlphaHousePython/cpp_src/cython_debug/cython_debug_info_hap
AlphaHousePython/cpp_src/cython_debug/interpreter
AlphaHousePython/cpp_src/dist/AlphahousePython-0.0.0-cp36-cp36m-macosx_10_6_x86_64.whl
AlphaHousePython/src/CMakeLists.txt
AlphaHousePython/src/CTestTestfile.cmake
AlphaHousePython/src/Constants.c
AlphaHousePython/src/Constants.py
AlphaHousePython/src/Constants.so
AlphaHousePython/src/Genotype.py
AlphaHousePython/src/Haplotype.py
AlphaHousePython/src/HaplotypeLibrary.py
AlphaHousePython/src/HeuristicGeneProb.py
AlphaHousePython/src/Makefile
AlphaHousePython/src/PedigreeHolder.py
AlphaHousePython/src/Utils.py
AlphaHousePython/src/__init__.py
AlphaHousePython/src/__init__.pyc
AlphaHousePython/src/_faker.cxx
AlphaHousePython/src/_faker.py
AlphaHousePython/src/_faker.so
AlphaHousePython/src/cmake_install.cmake
AlphaHousePython/src/genotypesDiff.py
AlphaHousePython/src/CMakeFiles/CMakeDirectoryInformation.cmake
AlphaHousePython/src/CMakeFiles/progress.marks
AlphaHousePython/src/CMakeFiles/Constants.dir/C.includecache
AlphaHousePython/src/CMakeFiles/Constants.dir/Constants.c.o
AlphaHousePython/src/CMakeFiles/Constants.dir/DependInfo.cmake
AlphaHousePython/src/CMakeFiles/Constants.dir/build.make
AlphaHousePython/src/CMakeFiles/Constants.dir/cmake_clean.cmake
AlphaHousePython/src/CMakeFiles/Constants.dir/depend.internal
AlphaHousePython/src/CMakeFiles/Constants.dir/depend.make
AlphaHousePython/src/CMakeFiles/Constants.dir/flags.make
AlphaHousePython/src/CMakeFiles/Constants.dir/link.txt
AlphaHousePython/src/CMakeFiles/Constants.dir/progress.make
AlphaHousePython/src/CMakeFiles/_faker.dir/CXX.includecache
AlphaHousePython/src/CMakeFiles/_faker.dir/DependInfo.cmake
AlphaHousePython/src/CMakeFiles/_faker.dir/_faker.cxx.o
AlphaHousePython/src/CMakeFiles/_faker.dir/build.make
AlphaHousePython/src/CMakeFiles/_faker.dir/cmake_clean.cmake
AlphaHousePython/src/CMakeFiles/_faker.dir/depend.internal
AlphaHousePython/src/CMakeFiles/_faker.dir/depend.make
AlphaHousePython/src/CMakeFiles/_faker.dir/flags.make
AlphaHousePython/src/CMakeFiles/_faker.dir/link.txt
AlphaHousePython/src/CMakeFiles/_faker.dir/progress.make
AlphaHousePython/src/__pycache__/Constants.cpython-36.pyc
AlphaHousePython/src/__pycache__/Genotype.cpython-36.pyc
AlphaHousePython/src/__pycache__/Haplotype.cpython-36.pyc
AlphaHousePython/src/__pycache__/HaplotypeLibrary.cpython-36.pyc
AlphaHousePython/src/__pycache__/PedigreeHolder.cpython-36.pyc
AlphaHousePython/src/__pycache__/Utils.cpython-36.pyc
AlphaHousePython/src/__pycache__/__init__.cpython-36.pyc
AlphaHousePython/src/__pycache__/_faker.cpython-36.pyc
AlphahousePython.egg-info/PKG-INFO
AlphahousePython.egg-info/SOURCES.txt
AlphahousePython.egg-info/dependency_links.txt
AlphahousePython.egg-info/top_level.txt