ASYNC_GUIDE.md
COVALENT_COMPLEX_GUIDE.md
LICENSE
MANIFEST.in
PARAMETERS.md
README.md
YAML_GUIDE.md
pyproject.toml
boltz2_client/__init__.py
boltz2_client/__main__.py
boltz2_client/a3m_to_csv_converter.py
boltz2_client/cli.py
boltz2_client/client.py
boltz2_client/exceptions.py
boltz2_client/models.py
boltz2_client/models_affinity.py
boltz2_client/msa_search.py
boltz2_client/multi_endpoint_client.py
boltz2_client/utils.py
boltz2_client/virtual_screening.py
boltz2_client/data/__init__.py
boltz2_client/data/speclist.txt
boltz2_python_client.egg-info/PKG-INFO
boltz2_python_client.egg-info/SOURCES.txt
boltz2_python_client.egg-info/dependency_links.txt
boltz2_python_client.egg-info/entry_points.txt
boltz2_python_client.egg-info/requires.txt
boltz2_python_client.egg-info/top_level.txt
examples/01_basic_protein_folding.py
examples/02_protein_structure_prediction_with_msa.py
examples/03_protein_ligand_complex.py
examples/04_covalent_bonding.py
examples/05_dna_protein_complex.py
examples/06_yaml_configurations.py
examples/07_advanced_parameters.py
examples/08_affinity_prediction_simple.py
examples/09_virtual_screening.py
examples/10_msa_search_integration.py
examples/11_msa_search_large_protein.py
examples/12_msa_affinity_prediction.py
examples/15_a3m_to_multimer_csv.py
examples/barnase_barstar_with_msa.py
examples/cdk4_msa_affinity_example.py
examples/comprehensive_multi_endpoint_demo.py
examples/debug_msa_conversion.py
examples/dimer_examples.py
examples/fix_cdk4_msa_search.py
examples/msa-kras-g12c_combined.a3m
examples/msa_search_simple_demo.py
examples/multi_endpoint_screening.py
examples/multi_protein_complex.yaml
examples/multimer_file_output_example.py
examples/multimer_msa_example.py
examples/protein_ligand.yaml
examples/quick_barnase_barstar.py
examples/quick_barnase_barstar_msa.py
examples/quick_gcn4_homodimer.py
examples/quick_heterodimer_example.py
examples/quick_msa_test.py
examples/sars_cov2_mpro_nirmatrelvir.yaml
examples/simple_dimer_examples.py
examples/test_boltz2_server.py
examples/test_cdk4_msa_fixed.py
examples/test_cdk4_msa_simple.py
examples/test_msa_a3m_simple.py
examples/test_msa_endpoint.py
examples/test_notebook_fixes.py
examples/cdk4_msa_affinity/cdk4_direct.a3m
examples/cdk4_msa_affinity/cdk4_msa.a3m
examples/cdk4_msa_affinity/cdk4_simple.a3m
licenses/PyYAML-LICENSE
licenses/README.md
licenses/aiofiles-LICENSE
licenses/click-LICENSE
licenses/httpx-LICENSE
licenses/py3Dmol-LICENSE
licenses/pydantic-LICENSE
licenses/rich-LICENSE
licenses/typing-extensions-LICENSE
tests/__init__.py
tests/conftest.py
tests/test_basic.py
tests/test_cli_multi_endpoint.py
tests/test_comprehensive_stress.py
tests/test_examples_syntax.py
tests/test_integration_scenarios.py
tests/test_msa_search.py
tests/test_multi_endpoint_functionality.py
tests/test_real_endpoints.py