Metadata-Version: 2.1
Name: ctd-python
Version: 0.1.3
Summary: Python interface to access data from The Comparative Toxicogenomics Database (CTD)
Home-page: UNKNOWN
License: UNKNOWN
Description: ## CTD Python
        
        Pyhton interface to access data from The Comparative Toxicogenomics Database (CTD)
        
        ### install
        
        ```
        pip3 install ctd-python
        ```
        
        ### import the package in order to pull the data
        
        ```
        from ctd import get_data
        ```
        
        ## The package offers the following resources as DataFrames
        
        - GeneInteractionTypes
        - ChemicalPathwaysEnriched
        - GeneDisease
        - GenePathways
        - DiseasePathways
        - ChemocalPhenoTypeInteractions
        - Chemicals
        - Genes
        - ChemicalGeneInteractions
        - Chemicals
        - Diseases
        
        ### Get the Gene Information for TNF
        ```
        gene_df = get_data('Genes')
        tnf_df = gene_df[gene_df['GeneSymbol'] == 'TNF']
        ```
        
        ### Get Chemical Interactions for TNF
        ```
        chem_gene_df = get_data('ChemicalGeneInteractions')
        tnf_chem_df = chem_gene_df[chem_gene_df['GeneSymbol'] == 'TNF']
        ```
        
        ### Get Disease Hierarchy for Parkinson Disease
        ```
        child_diseases = get_disease_hierarchy('MESH:D010300')
        ```
        
Platform: UNKNOWN
Description-Content-Type: text/markdown
