.coveragerc
.gitignore
.readthedocs.yml
LICENSE
MANIFEST.in
README.md
meta.yaml
requirements.txt
setup.cfg
setup.py
.github/workflows/python-publish.yml
data/circle_data.csv
data/curve_data.csv
data/tree_data.csv
doc/Makefile
doc/api.rst
doc/basics.ipynb
doc/conf.py
doc/contributing.rst
doc/elpigraph.CollapseBranches.rst
doc/elpigraph.ExtendLeaves.rst
doc/elpigraph.ShiftBranching.rst
doc/elpigraph.addPath.rst
doc/elpigraph.computeElasticPrincipalCircle.rst
doc/elpigraph.computeElasticPrincipalCurve.rst
doc/elpigraph.computeElasticPrincipalTree.rst
doc/elpigraph.delPath.rst
doc/elpigraph.findPaths.rst
doc/elpigraph.fineTuneBR.rst
doc/elpigraph.generateInitialConfiguration.rst
doc/elpigraph.plot.PlotPG.rst
doc/elpigraph.utils.getProjection.rst
doc/elpigraph.utils.getPseudotime.rst
doc/elpigraph.utils.getWeights.rst
doc/graph_editing.ipynb
doc/index.rst
doc/installation.rst
doc/make.bat
doc/quick_start.rst
doc/references.rst
doc/release_notes.rst
doc/requirements.txt
doc/_static/css/custom.css
doc/_static/css/project-template.css
doc/_templates/autosummary/base.rst
doc/_templates/autosummary/class.rst
elpigraph/.coverage
elpigraph/_AlterStructure.py
elpigraph/_BaseElPiWrapper.py
elpigraph/_EMAdjustment.py
elpigraph/__init__.py
elpigraph/_graph_editing.py
elpigraph/_topologies.py
elpigraph/_version.py
elpigraph/plot.py
elpigraph/utils.py
elpigraph/src/BaseElPi.py
elpigraph/src/PCA.py
elpigraph/src/__init__.py
elpigraph/src/core.py
elpigraph/src/distutils.py
elpigraph/src/grammar_operations.py
elpigraph/src/graphs.py
elpigraph/src/reporting.py
elpigraph/src/supervised.py
elpigraph/src/synthetic.py
elpigraph/tests/__init__.py
elpigraph/tests/test_all_params.py
elpigraph_python.egg-info/PKG-INFO
elpigraph_python.egg-info/SOURCES.txt
elpigraph_python.egg-info/dependency_links.txt
elpigraph_python.egg-info/not-zip-safe
elpigraph_python.egg-info/requires.txt
elpigraph_python.egg-info/top_level.txt