LICENSE
README.md
pyproject.toml
src/omnibioai_tool_exec/__init__.py
src/omnibioai_tool_exec/version.py
src/omnibioai_tool_exec.egg-info/PKG-INFO
src/omnibioai_tool_exec.egg-info/SOURCES.txt
src/omnibioai_tool_exec.egg-info/dependency_links.txt
src/omnibioai_tool_exec.egg-info/entry_points.txt
src/omnibioai_tool_exec.egg-info/requires.txt
src/omnibioai_tool_exec.egg-info/top_level.txt
src/omnibioai_tool_exec/cli/__init__.py
src/omnibioai_tool_exec/cli/main.py
src/omnibioai_tool_exec/client/__init__.py
src/omnibioai_tool_exec/execution/__init__.py
src/omnibioai_tool_exec/execution/runner.py
src/omnibioai_tool_exec/execution/adapters/__init__.py
src/omnibioai_tool_exec/execution/adapters/aws_batch.py
src/omnibioai_tool_exec/execution/adapters/azure_batch.py
src/omnibioai_tool_exec/execution/adapters/base.py
src/omnibioai_tool_exec/execution/adapters/http_toolserver.py
src/omnibioai_tool_exec/execution/adapters/k8s_job.py
src/omnibioai_tool_exec/execution/adapters/local.py
src/omnibioai_tool_exec/execution/adapters/lsf.py
src/omnibioai_tool_exec/execution/adapters/pbs.py
src/omnibioai_tool_exec/execution/adapters/sge.py
src/omnibioai_tool_exec/execution/adapters/slurm.py
src/omnibioai_tool_exec/execution/adapters/ssh_restricted.py
src/omnibioai_tool_exec/execution/tools/__init__.py
src/omnibioai_tool_exec/execution/tools/bcftools_view_real.py
src/omnibioai_tool_exec/execution/tools/blastn_real.py
src/omnibioai_tool_exec/models/__init__.py
src/omnibioai_tool_exec/models/capabilities.py
src/omnibioai_tool_exec/models/run_models.py
src/omnibioai_tool_exec/models/server_spec.py
src/omnibioai_tool_exec/models/tool_spec.py
src/omnibioai_tool_exec/registry/__init__.py
src/omnibioai_tool_exec/registry/loaders.py
src/omnibioai_tool_exec/registry/server_registry.py
src/omnibioai_tool_exec/registry/tool_registry.py
src/omnibioai_tool_exec/routing/__init__.py
src/omnibioai_tool_exec/routing/compatibility.py
src/omnibioai_tool_exec/routing/router.py
src/omnibioai_tool_exec/service/__init__.py
src/omnibioai_tool_exec/service/app.py
src/omnibioai_tool_exec/service/api/__init__.py
src/omnibioai_tool_exec/service/api/routes_runs.py
src/omnibioai_tool_exec/service/api/routes_servers.py
src/omnibioai_tool_exec/service/api/routes_tools.py
src/omnibioai_tool_exec/store/__init__.py
src/omnibioai_tool_exec/store/run_store.py
tests/test_run_store.py
tests/test_runs_local.py
tests/test_smoke.py